ZFIN ID: ZDB-GENE-040824-3
Gene Name: replication factor C (activator 1) 4
Gene Symbol: rfc4
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:64030

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to contribute to DNA clamp loader activity; involved in retina development in camera-type eye; predicted to localize to the DNA replication factor C complex and nucleus; orthologous to  ...
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (14 images) from Thisse et al., 2004 [MGC:64030]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi2877aTg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35172 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE
    Data: 2 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH rfc4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rfc4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process retina development in camera-type eye (more)
    Cellular Component DNA replication factor C complex (more)
    Molecular Function ATP binding (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003593 (1)
  • InterPro:IPR003959 (1)
  • InterPro:IPR008921 (1)
  • InterPro:IPR013748 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF00004 (1)
  • Pfam:PF08542 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rfc4-001 (1) 1622
    rfc4-002 (1) 811
    rfc4-003 (1) 809
    aberrant processed transcript rfc4-004 (1) 638
    mRNA rfc4-005 (1) 441
    rfc4-006 (1) 305
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rfc4 No data available
    MARKER RELATIONSHIPS
    rfc4Encodes: [cDNA] MGC:64030 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_214737 (1) 1362bp
    Polypeptide UniProtKB:A0A0R4IAU3 (1) 358aa
    Sequence Clusters UniGene:77554 (1)
    Sequence Information (all 19)
    OTHER rfc4 GENE PAGES
  • Alliance (1)
  • Gene:406435 (1)
  • VEGA:OTTDARG00000043149 (1)
  • Ensembl(GRCz11):ENSDARG00000042458 (2)
  • ORTHOLOGY for rfc4 (Chr: 11)
    CITATIONS (28)