ZFIN ID: ZDB-GENE-040822-27
Gene Name: neuronal growth regulator 1
Gene Symbol: negr1    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:100871

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Exhibits identical protein binding activity. Is expressed in head. Orthologous to human NEGR1 (neuronal growth regulator 1).
Genome Resources: Alliance (1),  Gene:445374 (1),  Ensembl(GRCz11):ENSDARG00000021607 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7141308]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
a367 Complex Unknown Unknown CRISPR
sa38560 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-negr1 2
    CRISPR2-negr1 2
    CRISPR3-negr1 1
    CRISPR4-negr1 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH negr1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH negr1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function identical protein binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA negr1-201 (1)    Ensembl 2472
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM negr1 No data available
    MARKER RELATIONSHIPS
    negr1 Contained in: [BAC] CH211-255N14 (1), DKEY-242M17 (1) (order this), RP71-80I17 (1)
    negr1 Encodes: [EST] IMAGE:7141308 (1)
    [cDNA] cssl:d814 (1), MGC:100871 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001003851 (1) 2455 nt
    Genomic GenBank:BX950870 (1) 186279 nt
    Select Tool
    Polypeptide UniProtKB:A0A4W4 (1) 346 aa
    Sequence Information (all 20)
    ORTHOLOGY for negr1 ( Chr: 6 )
    CITATIONS (28)