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ZIRC
ZFIN ID: ZDB-GENE-040822-14
Gene Name: zgc:101016
Gene Symbol: zgc:101016
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Orthologous to human C9orf85 (chromosome 9 open reading frame 85).

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7150543]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa18141 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18284 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:101016 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:101016 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019351 (1)
  • Pfam:PF10217 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zgc:101016-201 (1) 2743
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:101016 No data available
    MARKER RELATIONSHIPS
    zgc:101016Contained in: [BAC] DKEY-24K20 (1) (order this)
    zgc:101016Encodes: [EST] IMAGE:7150543 (1) (order this)
    [cDNA] MGC:101016 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001004001 (1) 2100bp
    Genomic GenBank:BX294191 (1) 185868bp
    Select Tool
    Polypeptide UniProtKB:A3KPQ4 (1) 163aa
    Sequence Clusters UniGene:34238 (1)
    Sequence Information (all 11)
    ORTHOLOGY for zgc:101016 (Chr: 5)
    CITATIONS (15)