ZFIN ID: ZDB-GENE-040801-91
Gene Name: alanyl-tRNA synthetase domain containing 1
Gene Symbol: aarsd1
Sequence Ontology ID : SO:0000704

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Previous Names: im:7152658, zgc:101066 (1)

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [IMAGE:7152658]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa18183 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41961 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH aarsd1 HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process translation (more)
    Cellular Component cytoplasm (more)
    Molecular Function aminoacyl-tRNA ligase activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR009000 (1)
  • InterPro:IPR012947 (1)
  • InterPro:IPR018163 (1)
  • Pfam:PF07973 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA aarsd1-001 (1) 1589
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM aarsd1 No data available
    MARKER RELATIONSHIPS
    aarsd1Contained in: [BAC] CH211-215L11 (1) (order this)
    aarsd1Encodes: [EST] IMAGE:7152658 (1) (order this)
    [cDNA] MGC:101066 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003572 (1) 1603bp
    Genomic GenBank:BX248126 (1) 193490bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IZV4 (1) 413aa
    Sequence Clusters UniGene:88663 (1)
    Sequence Information (all 13)
    OTHER aarsd1 GENE PAGES
  • Alliance (1)
  • Gene:445178 (1)
  • VEGA:OTTDARG00000021748 (1)
  • Ensembl(GRCz10):ENSDARG00000015747 (1)
  • ORTHOLOGY for aarsd1 (Chr: 12)
    CITATIONS (19)