Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040801-91
Gene Name: alanyl-tRNA synthetase domain containing 1
Gene Symbol: aarsd1
Previous Names: im:7152658, zgc:101066 (1)
Location: Chr: 12   Details
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [IMAGE:7152658]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Hatching:Long-pec (48.0h-60.0h)
  hypaxial myotome region, midbrain, myotome, optic vesicle (all 7) expand
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa18183
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process tRNA aminoacylation (more)
Cellular Component cytoplasm (more)
Molecular Function ATP binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR009000 (1)
  • InterPro:IPR012947 (1)
  • InterPro:IPR018163 (1)
  • Pfam:PF07973 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA aarsd1-001 (1) 1589
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM aarsd1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    aarsd1 Contained in: [BAC] CH211-215L11 (1) (order this)
    aarsd1 Encodes: [EST] IMAGE:7152658 (1) (order this)
    [cDNA] MGC:101066 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003572 (1) 1603 bp
    Genomic GenBank:BX248126 (1) 193490 bp
    Select Tool
    Polypeptide UniProtKB:F1QPA7 (1) 412 aa
    Sequence Clusters UniGene:88663 (1)
    Sequence Information (all 15)
    OTHER aarsd1 GENE PAGES
  • Gene:445178 (1)
  • VEGA:OTTDARG00000021748 (1)
  • Ensembl(Zv9):ENSDARG00000015747 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish aarsd1 12  
    Human AARSD1 17 (17q21.31)
  • OMIM:613212
  • Gene:80755
  • Mouse Aarsd1 11 ( 64.95 cM)
  • MGI:1916934
  • Gene:69684
  • Orthology Details
    CITATIONS (15)