ZFIN ID: ZDB-GENE-040801-91
Gene Name: alanyl-tRNA synthetase domain containing 1
Gene Symbol: aarsd1
Previous Names: im:7152658, zgc:101066 (1)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [IMAGE:7152658]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Hatching:Long-pec (48.0h-60.0h)
  hypaxial myotome region, midbrain, myotome, optic vesicle (all 7) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS 
Allele Type Mutagen Suppliers
sa18183 Point Mutation ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH aarsd1 HUMAN ORTHOLOG No data available
    GENE ONTOLOGY 
    Ontology GO Term
    Biological Process tRNA aminoacylation (more)
    Cellular Component cytoplasm (more)
    Molecular Function ATP binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR009000 (1)
  • InterPro:IPR012947 (1)
  • InterPro:IPR018163 (1)
  • Pfam:PF07973 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA aarsd1-001 (1) 1589
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM aarsd1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS 
    aarsd1Contained in: [BAC] CH211-215L11 (1) (order this)
    aarsd1Encodes: [EST] IMAGE:7152658 (1) (order this)
    [cDNA] MGC:101066 (1) (order this)
    SEQUENCE INFORMATION 
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003572 (1) 1603bp
    Genomic GenBank:BX248126 (1) 193490bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IZV4 (1) 413aa
    Sequence Clusters UniGene:88663 (1)
    Sequence Information (all 12)
    OTHER aarsd1 GENE PAGES 
  • Gene:445178 (1)
  • VEGA:OTTDARG00000021748 (1)
  • Ensembl(GRCz10):ENSDARG00000015747 (1)
  • ORTHOLOGY for aarsd1 (Chr: 12) 
    Species Symbol Chromosome Accession # Evidence
    Human AARSD1 17
  • Gene:80755
  • OMIM:613212
  • HGNC:28417
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Mouse Aarsd1 11
  • MGI:1916934
  • Gene:69684
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (17)