ZFIN ID: ZDB-GENE-040801-82
Gene Name: zgc:101100
Gene Symbol: zgc:101100    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to the nucleus.
Genome Resources: Alliance (1),  Gene:445169 (1),  Ensembl(GRCz11):ENSDARG00000021959 (2)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa34375 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:101100 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:101100 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR001356 Homeobox domain
    Homologous_superfamily IPR009057 Homeobox-like domain superfamily
    Conserved_site IPR017970 Homeobox, conserved site
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:101100-201 (1)    Ensembl 1858
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:101100 No data available
    MARKER RELATIONSHIPS
    zgc:101100 Contained in: [BAC] CH211-226F3 (1), RP71-24N4 (1)
    zgc:101100 Encodes: [cDNA] MGC:101100 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003563 (1) 1920 bp
    Genomic GenBank:BX323082 (1) 99221 bp
    Select Tool
    Polypeptide UniProtKB:B0S606 (1) 266 aa
    Sequence Information (all 11)
    ORTHOLOGY for zgc:101100 ( Chr: 8 )
    CITATIONS (16)