Gene

lsm1

ID
ZDB-GENE-040801-68
Name
LSM1, U6 small nuclear RNA associated
Symbol
lsm1 Nomenclature History
Previous Names
  • zgc:101136 (1)
Type
protein_coding_gene
Location
Chr: 8 Mapping Details/Browsers
Description
Predicted to have RNA cap binding activity. Predicted to be involved in deadenylation-dependent decapping of nuclear-transcribed mRNA. Predicted to localize to Lsm1-7-Pat1 complex and P-body. Orthologous to human LSM1 (LSM1 homolog, mRNA degradation associated).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With lsm1 Human Ortholog
No data available
Associated With lsm1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001163 Sm domain, eukaryotic/archaea-type
Domain IPR034104 Sm-like protein Lsm1
Domain IPR047575 Sm domain
Family IPR044642 U6 snRNA-associated Sm-like protein Lsm1/8
Homologous_superfamily IPR010920 LSM domain superfamily
Domain Details Per Protein
Protein Length LSM domain superfamily Sm domain Sm domain, eukaryotic/archaea-type Sm-like protein Lsm1 U6 snRNA-associated Sm-like protein Lsm1/8
UniProtKB:Q6DBW5 133
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations