ZFIN ID: ZDB-GENE-040801-44
Gene Name: homer scaffold protein 1b
Gene Symbol: homer1b    Nomenclature History

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Previous Names: homer1, zgc:100854, zgc:92844

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have G protein-coupled glutamate receptor binding activity. Involved in cellular calcium ion homeostasis and muscle structure development. Predicted to localize to several cellular components, including dendrite; plasma membrane; and postsynaptic density. Is expressed in several structures, including basal plate midbrain region; cardiovascular system; musculature system; nervous system; and post-vent region. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 68. Orthologous to several human genes including HOMER1 (homer scaffold protein 1).
Genome Resources: Alliance (1),  Gene:436769 (1),  Ensembl(GRCz11):ENSDARG00000101759 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-homer1b N/A 1
DISEASE ASSOCIATED WITH homer1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH homer1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular calcium ion homeostasis (more)
Cellular Component cytoplasm (more)
Molecular Function G protein-coupled glutamate receptor binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA homer1b-202 (1)    Ensembl 2450
homer1b-203 (1)    Ensembl 2349
ncRNA ottdart00000061888 (1) 1463
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM homer1b No data available
MARKER RELATIONSHIPS
homer1b Contained in: [BAC] CH211-262A22 (1), RP71-26J15 (1)
homer1b Encodes: [EST] IMAGE:7140241 (1)
[cDNA] MGC:92844 (1), MGC:100854 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001002496 (1) 2380 nt
Genomic GenBank:CT033828 (1) 154862 nt
Select Tool
Polypeptide UniProtKB:B8JIC5 (1) 398 aa
Sequence Information (all 23)
ORTHOLOGY for homer1b ( Chr: 5 )
CITATIONS (19)