ZFIN ID: ZDB-GENE-040801-44
Gene Name: homer scaffold protein 1b
Gene Symbol: homer1b
Sequence Ontology ID : SO:0000704

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Previous Names: homer1, zgc:100854, zgc:92844

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have G protein-coupled glutamate receptor binding activity; involved in cellular calcium ion homeostasis and muscle structure development; predicted to localize to several cellular  ...
GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 4 figures (6 images) from Thisse et al., 2004 [IMAGE:7140241]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: 2 figures from Lin et al., 2013
Observed in:
DISEASE ASSOCIATED WITH homer1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH homer1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular calcium ion homeostasis (more)
Molecular Function G protein-coupled glutamate receptor binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000697 (1)
  • InterPro:IPR011993 (1)
  • PROSITE:PS50229 (1)
  • Pfam:PF00568 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA homer1b-202 (1) 2450
    homer1b-203 (1) 2349
    ncRNA ottdart00000061888 (1) 1463
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM homer1b No data available
    MARKER RELATIONSHIPS
    homer1bContained in: [BAC] CH211-262A22 (1) (order this), RP71-26J15 (1) (order this)
    homer1bEncodes: [EST] IMAGE:7140241 (1) (order this)
    [cDNA] MGC:92844 (1) (order this), MGC:100854 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002496 (1) 2380bp
    Genomic GenBank:CT033828 (1) 154862bp
    Select Tool
    Polypeptide UniProtKB:B8JIC5 (1) 398aa
    Sequence Clusters UniGene:134732 (1)
    Sequence Information (all 25)
    OTHER homer1b GENE PAGES
  • Alliance (1)
  • Gene:436769 (1)
  • VEGA:OTTDARG00000042825 (1)
  • Ensembl(GRCz11):ENSDARG00000101759 (1)
  • ORTHOLOGY for homer1b (Chr: 5)
    CITATIONS (17)