ZFIN ID: ZDB-GENE-040801-264
Gene Name: 3-hydroxyisobutyrate dehydrogenase a
Gene Symbol: hibadha    Nomenclature History

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Previous Names: wu:fb07f02, zgc:100804

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have 3-hydroxyisobutyrate dehydrogenase activity. Predicted to be involved in valine catabolic process. Predicted to localize to mitochondrion. Is expressed in mesenchyme pectoral fin and myoblast. Orthologous to human HIBADH (3-hydroxyisobutyrate dehydrogenase).
Genome Resources: Alliance (1),  Gene:445252 (1),  Ensembl(GRCz11):ENSDARG00000102906 (1)
GENE EXPRESSION
All Expression Data: Fig. 7 from Ahn et al., 2008
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Hatching:Long-pec (48.0h-60.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la020636Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17219 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43258 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hibadha HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hibadha VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process branched-chain amino acid catabolic process (more)
    Cellular Component mitochondrion (more)
    Molecular Function 3-hydroxyisobutyrate dehydrogenase activity (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA hibadha-201 (1)    Ensembl 1623
    hibadha-202 (1)    Ensembl 607
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM hibadha No data available
    MARKER RELATIONSHIPS
    hibadha Contained in: [BAC] CH211-204J16 (1)
    hibadha Encodes: [EST] fb07f02 (1)
    [cDNA] MGC:100804 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001003646 (1) 1620 nt
    Genomic GenBank:BX601646 (1) 163533 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4IA23 (1) 328 aa
    Sequence Information (all 17)
    ORTHOLOGY for hibadha ( Chr: 19 )
    CITATIONS (26)