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General Information
ZIRC
ZFIN ID: ZDB-GENE-040801-25
Gene Name: TATA element modulatory factor 1
Gene Symbol: tmf1
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:100899

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Orthologous to human TMF1 (TATA element modulatory factor 1).
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7148757]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH tmf1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH tmf1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process biological_process (more)
Cellular Component cellular_component (more)
Molecular Function molecular_function (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR022091 (1)
  • InterPro:IPR022092 (1)
  • Pfam:PF12325 (1)
  • Pfam:PF12329 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tmf1-201 (1) 4782
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tmf1 No data available
    MARKER RELATIONSHIPS
    tmf1Contained in: [BAC] DKEY-79I1 (1) (order this)
    tmf1Encodes: [EST] IMAGE:7148757 (1) (order this), fc42e09 (1)
    [cDNA] MGC:100899 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003522 (1) 3850bp
    Genomic GenBank:AL954814 (1) 175477bp
    Select Tool
    Polypeptide UniProtKB:Q6DEI1 (1) 1136aa
    Sequence Clusters UniGene:14269 (1)
    Sequence Information (all 18)
    ORTHOLOGY for tmf1 (Chr: 11)
    CITATIONS (17)