ZFIN ID: ZDB-GENE-040801-180
Gene Name: LHFPL tetraspan subfamily member 3
Gene Symbol: lhfpl3    Nomenclature History

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Previous Name: zgc:92534

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 4 Mapping Details/Browsers
Description: Predicted to be involved in sensory perception of sound. Predicted to localize to plasma membrane. Is expressed in central nervous system. Orthologous to human LHFPL3 (LHFPL tetraspan subfamily member 3).
Genome Resources: Alliance (1),  Gene:445050 (1),  Ensembl(GRCz11):ENSDARG00000021595 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 7 figures (12 images) from Thisse et al., 2004 [MGC:92534]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20275 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH lhfpl3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH lhfpl3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process sensory perception of sound (more)
    Cellular Component integral component of membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA lhfpl3-201 (1)    Ensembl 2519
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM lhfpl3 No data available
    MARKER RELATIONSHIPS
    lhfpl3 Contained in: [BAC] DKEY-9A20 (1) (order this)
    lhfpl3 Encodes: [cDNA] MGC:92534 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001003444 (1) 1946 nt
    Genomic GenBank:BX537162 (1) 223816 nt Blast at MegaBLAST
    Polypeptide UniProtKB:Q6DHB5 (1) 216 aa
    Sequence Information (all 9)
    ORTHOLOGY for lhfpl3 ( Chr: 4 )
    CITATIONS (21)