ZFIN ID: ZDB-GENE-040801-145
Gene Name: nucleoporin 85
Gene Symbol: nup85
Sequence Ontology ID : SO:0000704

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Previous Names: pcnt1, zgc:100943

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be a structural constituent of nuclear pore; predicted to be involved in mRNA export from nucleus, positive regulation of transcription, DNA-templated, and protein import into nucleus;  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7138736]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa5182 Point Mutation Unknown Splice Site ENU
sa19941 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nup85 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    nephrotic syndrome type 17 Nephrotic syndrome, type 17 618176
    DISEASE ASSOCIATED WITH nup85 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process nephron development (more)
    Cellular Component nuclear pore outer ring (more)
    Molecular Function structural constituent of nuclear pore (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011502 (1)
  • Pfam:PF07575 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nup85-001 (1) 1106
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nup85 No data available
    MARKER RELATIONSHIPS
    nup85Contained in: [BAC] CH73-157I16 (1) (order this)
    nup85Encodes: [EST] IMAGE:7138736 (1) (order this)
    [cDNA] MGC:100943 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003625 (1) 2205bp
    Genomic GenBank:CU929417 (1) 78125bp
    Select Tool
    Polypeptide UniProtKB:Q6DBY0 (1) 649aa
    Sequence Clusters UniGene:98 (1)
    Sequence Information (all 16)
    OTHER nup85 GENE PAGES
  • Alliance (1)
  • Gene:445231 (1)
  • VEGA:OTTDARG00000034457 (1)
  • Ensembl(GRCz11):ENSDARG00000098679 (1)
  • ORTHOLOGY for nup85 (Chr: 3)
    CITATIONS (22)