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ZIRC
ZFIN ID: ZDB-GENE-040724-51
Gene Name: opsin 8, group member c
Gene Symbol: opn8c    Nomenclature History

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Previous Names: novopsin-9 (1), Opn5L2c (1), si:dkey-30h14.3

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to have G protein-coupled photoreceptor activity. Involved in phototransduction. Predicted to localize to the integral component of plasma membrane. Is expressed in several structures, including brain; eye; heart; integument; and testis.
Genome Resources: Alliance (1),  Gene:103909302 (1),  Ensembl(GRCz11):ENSDARG00000043479 (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH opn8c HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH opn8c VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process phototransduction (more)
Cellular Component integral component of membrane (more)
Molecular Function G protein-coupled receptor activity (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000276 (1)
  • InterPro:IPR017452 (1)
  • PROSITE:PS50262 (1)
  • Pfam:PF00001 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA opn8c-202 (1)    Ensembl 1027
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM opn8c No data available
    MARKER RELATIONSHIPS
    opn8c Contained in: [BAC] DKEY-30H14 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001317764 (1)
    Genomic GenBank:BX248403 (1) 154669 bp
    Select Tool
    Polypeptide UniProtKB:F1R302 (1) 398 aa
    Sequence Information (all 9)
    ORTHOLOGY for opn8c ( Chr: 20 )
    CITATIONS (19)