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ZIRC
ZFIN ID: ZDB-GENE-040724-235
Gene Name: rhophilin associated tail protein 1-like
Gene Symbol: ropn1l    Nomenclature History

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Previous Names: si:rp71-1f1.7, zgc:101773

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Involved in spermatid development. Predicted to localize to the motile cilium. Is expressed in testis. Orthologous to human ROPN1L (rhophilin associated tail protein 1 like).
Genome Resources: Alliance (1),  Gene:798354 (1),  Ensembl(GRCz11):ENSDARG00000058370 (1)
GENE EXPRESSION
All Expression Data: 2 figures from Hsu et al., 2010
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028614Tg Transgenic Insertion Unknown Unknown DNA
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ropn1l HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ropn1l VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process spermatid development (more)
Cellular Component cell projection (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA ropn1l-202 (1)    Ensembl 767
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM ropn1l
Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
Tg(ropn1l:EGFP-Eco.NfnB) ropn1l EGFP Danio rerioEscherichia coli 1 3
MARKER RELATIONSHIPS
ropn1l Contained in: [BAC] RP71-1F1 (order this)
ropn1l Encodes: [cDNA] MGC:101773 (1) (order this), MGC:173787 (1) (order this), MGC:192218 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001004624 (1) 992 bp
Genomic GenBank:CR753885 (1) 145872 bp
Select Tool
Polypeptide UniProtKB:B2GR96 (1) 218 aa
Sequence Clusters UniGene:85577 (1)
Sequence Information (all 24)
ORTHOLOGY for ropn1l ( Chr: 24 )
CITATIONS (20)