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ZIRC
ZFIN ID: ZDB-GENE-040724-168
Gene Name: si:ch211-285c6.2
Gene Symbol: si:ch211-285c6.2    Nomenclature History

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Previous Name: zgc:158621

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have protein serine/threonine kinase activity. Predicted to be involved in animal organ morphogenesis and cilium assembly. Predicted to localize to the cilium.
Genome Resources: Alliance (1),  Gene:791193 (1),  Ensembl(GRCz11):ENSDARG00000079234 (2)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa40824 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:ch211-285c6.2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:ch211-285c6.2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process lipid transport (more)
    Cellular Component extracellular region (more)
    Molecular Function ATP binding (more)
    GO Terms (all 13)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:ch211-285c6.2-202 (1)    Ensembl 1834
    ncRNA si:ch211-285c6.2-002 (1)    Ensembl 422
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-285c6.2 No data available
    MARKER RELATIONSHIPS
    si:ch211-285c6.2 Contained in: [BAC] CH211-285C6 (order this)
    si:ch211-285c6.2 Encodes: [cDNA] MGC:158621 (1) (order this), MGC:192962 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080675 (1) 2178 bp
    Genomic GenBank:AL954323 (1) 165873 bp
    Select Tool
    Polypeptide UniProtKB:A1L233 (1) 590 aa
    Sequence Clusters UniGene:17074 (1)
    Sequence Information (all 20)
    ORTHOLOGY for si:ch211-285c6.2 ( Chr: 7 )
    CITATIONS (16)