ZFIN ID: ZDB-GENE-040724-165
Gene Name: intraflagellar transport 140 homolog (Chlamydomonas)
Gene Symbol: ift140    Nomenclature History

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Previous Name: si:ch211-153c20.3 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Predicted to be involved in intraciliary retrograde transport. Predicted to localize to axoneme; ciliary basal body; and intraciliary transport particle A. Human ortholog(s) of this gene implicated in retinitis pigmentosa and short-rib thoracic dysplasia 9 with or without polydactyly. Orthologous to human IFT140 (intraflagellar transport 140).
Genome Resources: Alliance (1),  Gene:553213 (1),  Ensembl(GRCz11):ENSDARG00000031886 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa3253 Point Mutation Unknown Premature Stop ENU
sa8632 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24548 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37952 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39464 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44183 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45838 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-ift140 N/A 2
    DISEASE ASSOCIATED WITH ift140 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    short-rib thoracic dysplasia 9 with or without polydactyly Alliance Short-rib thoracic dysplasia 9 with or without polydactyly 266920
    Retinitis pigmentosa 80 617781
    DISEASE ASSOCIATED WITH ift140 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process intraciliary retrograde transport (more)
    Cellular Component axoneme (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    aberrant processed transcript ift140-202 (1)    Ensembl 741
    mRNA ift140-201 (1)    Ensembl 4885
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ift140 No data available
    MARKER RELATIONSHIPS
    ift140 Contained in: [BAC] CH211-153C20, CH211-248L17 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_009297635 (1)
    Genomic GenBank:AL772148 (1) 161218 nt
    Select Tool
    Polypeptide UniProtKB:F1QG20 (1) 1445 aa
    Sequence Information (all 23)
    ORTHOLOGY for ift140 ( Chr: 24 )
    CITATIONS (18)