header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040724-124
Gene Name: Yip1 domain family, member 2
Gene Symbol: yipf2
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: si:dkey-204f11.62 (1), zgc:91967

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have Rab GTPase binding activity. Predicted to be involved in vesicle-mediated transport. Predicted to localize to the Golgi apparatus. Orthologous to human YIPF2 (Yip1 domain family  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:91967]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20064 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH yipf2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH yipf2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process vesicle-mediated transport (more)
    Cellular Component Golgi apparatus (more)
    Molecular Function Rab GTPase binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006977 (1)
  • InterPro:IPR039765 (1)
  • Pfam:PF04893 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA yipf2-002 (1) 523
    yipf2-004 (1) 548
    mRNA yipf2-201 (1) 1622
    yipf2-204 (1) 743
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM yipf2 No data available
    MARKER RELATIONSHIPS
    yipf2Contained in: [BAC] DKEY-204F11 (order this)
    yipf2Encodes: [cDNA] MGC:91967 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003500 (1) 1625bp
    Genomic GenBank:BX649502 (1) 247387bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q6DBU9 (1) 304aa
    Sequence Clusters UniGene:105863 (1)
    Sequence Information (all 15)
    ORTHOLOGY for yipf2 (Chr: 3)
    CITATIONS (19)