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ZIRC
ZFIN ID: ZDB-GENE-040723-3
Gene Name: 3-oxoacid CoA transferase 1a
Gene Symbol: oxct1a    Nomenclature History

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Previous Names: oxct1, scot (1), SAGm18B (2), wu:fj36f06, wu:fj48g08, zgc:92003

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have 3-oxoacid CoA-transferase activity. Predicted to be involved in ketone body catabolic process. Predicted to localize to the mitochondrion. Is expressed in somite. Orthologous to several human genes including OXCT1 (3-oxoacid CoA-transferase 1).
Genome Resources: Alliance (1),  Gene:442923 (1),  Ensembl(GRCz11):ENSDARG00000013063 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 12 figures (18 images) from Rauch et al., 2003 [fc10c02]
Wild-type Stages, Structures: Blastula:30%-epiboly (4.66h-5.25h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
nksagm018bGt Transgenic Insertion Unknown Unknown DNA
sa45329 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH oxct1a HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Succinyl CoA:3-oxoacid CoA transferase deficiency 245050
    DISEASE ASSOCIATED WITH oxct1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ketone body catabolic process (more)
    Cellular Component mitochondrion (more)
    Molecular Function 3-oxoacid CoA-transferase activity (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA oxct1a-201 (1)    Ensembl 2666
    oxct1a-203 (1)    Ensembl 830
    oxct1a-204 (1)    Ensembl 719
    ncRNA oxct1a-002 (1)    Ensembl 492
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM oxct1a No data available
    MARKER RELATIONSHIPS
    oxct1a Contained in: [BAC] DKEY-46A10 (1) (order this), DKEY-174D5 (1) (order this), DKEY-250L23 (1) (order this)
    oxct1a Encodes: [EST] fc10c02 (1) (order this), fj36f06, fj48g08 (1)
    [cDNA] MGC:92003 (1) (order this), MGC:191147 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007291 (1) 2109 bp
    Genomic GenBank:BX571721 (1) 168402 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IJ61 (1) 563 aa
    Sequence Clusters UniGene:33791 (1)
    Sequence Information (all 26)
    ORTHOLOGY for oxct1a ( Chr: 8 )
    CITATIONS (26)