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General Information
ZIRC
ZFIN ID: ZDB-GENE-040720-1
Gene Name: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
Gene Symbol: ctdp1
Sequence Ontology ID : SO:0000704

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Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA polymerase II CTD heptapeptide repeat phosphatase activity. Predicted to be involved in dephosphorylation of RNA polymerase II C-terminal domain. Predicted to localize to the  ...
GENE EXPRESSION No data available
PHENOTYPE
Data: 2 figures from 2 publications
Observed in:
DISEASE ASSOCIATED WITH ctdp1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Congenital cataracts, facial dysmorphism, and neuropathy 604168
DISEASE ASSOCIATED WITH ctdp1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process dephosphorylation of RNA polymerase II C-terminal domain (more)
Cellular Component nucleus (more)
Molecular Function phosphoprotein phosphatase activity (more)
GO Terms (all 5)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA ctdp1-201 (1) 3022
GENE PRODUCT DESCRIPTION No description available
INTERACTIONS AND PATHWAYS
ANTIBODIESNo data available
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM ctdp1 No data available
MARKER RELATIONSHIPS
ctdp1Contained in: [BAC] CH211-139E14 (1) (order this), CH211-169C1 (1) (order this), DKEY-261N3 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001002873 (1) 2868bp
Genomic GenBank:CR548625 (1) 195124bp
Select Tool
Polypeptide UniProtKB:E7FFL3 (1) 947aa
Sequence Clusters UniGene:133831 (1)
Sequence Information (all 12)
ORTHOLOGY for ctdp1 (Chr: 19)
CITATIONS (20)