ZFIN ID: ZDB-GENE-040720-1
Gene Name: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
Gene Symbol: ctdp1    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have RNA polymerase II CTD heptapeptide repeat phosphatase activity. Predicted to be involved in dephosphorylation of RNA polymerase II C-terminal domain. Predicted to localize to nucleus. Orthologous to human CTDP1 (CTD phosphatase subunit 1).
Genome Resources: Alliance (1),  Gene:442930 (1),  Ensembl(GRCz11):ENSDARG00000017522 (2)
GENE EXPRESSION No data available
PHENOTYPE
Data: 2 figures from 2 publications
Observed in:
DISEASE ASSOCIATED WITH ctdp1 HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Congenital cataracts, facial dysmorphism, and neuropathy 604168
DISEASE ASSOCIATED WITH ctdp1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process dephosphorylation of RNA polymerase II C-terminal domain (more)
Cellular Component nucleus (more)
Molecular Function hydrolase activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA ctdp1-201 (1)    Ensembl 3022
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM ctdp1 No data available
MARKER RELATIONSHIPS
ctdp1 Contained in: [BAC] CH211-139E14 (1), CH211-169C1 (1), DKEY-261N3 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001002873 (1) 2868 nt
Genomic GenBank:CR548625 (1) 195124 nt
Select Tool
Polypeptide UniProtKB:E7FFL3 (1) 947 aa
Sequence Information (all 11)
ORTHOLOGY for ctdp1 ( Chr: 19 )
CITATIONS (25)