ZFIN ID: ZDB-GENE-040718-479
Gene Name: tuftelin interacting protein 11
Gene Symbol: tfip11    Nomenclature History

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Previous Names: fd15a02, wu:fd15a02, zgc:86644 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Predicted to have nucleic acid binding activity. Predicted to be involved in spliceosomal complex disassembly. Predicted to localize to the U2-type post-mRNA release spliceosomal complex. Orthologous to human TFIP11 (tuftelin interacting protein 11).
Genome Resources: Alliance (1),  Gene:436994 (1),  Ensembl(GRCz11):ENSDARG00000056932 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6893704]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa3219 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17454 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • DISEASE ASSOCIATED WITH tfip11 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tfip11 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mRNA processing (more)
    Cellular Component spliceosomal complex (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000467 G-patch domain
    Domain IPR022159 Tuftelin interacting protein, N-terminal domain
    Domain IPR022783 GC-rich sequence DNA-binding factor-like domain
    Family IPR024933 Septin and tuftelin interacting protein
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA tfip11-201 (1)    Ensembl 2739
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tfip11 No data available
    MARKER RELATIONSHIPS
    tfip11 Contained in: [BAC] CH211-248G18 (1)
    tfip11 Encodes: [EST] fd15a02, IMAGE:6893704 (1)
    [cDNA] MGC:86644 (1), MGC:113896 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002721 (1) 2769 bp
    Genomic GenBank:CR381647 (1) 179855 bp
    Select Tool
    Polypeptide UniProtKB:F1QQ02 (1) 832 aa
    Sequence Information (all 19)
    ORTHOLOGY for tfip11 ( Chr: 23 )
    CITATIONS (24)