Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040718-479
Gene Name: tuftelin interacting protein 11
Gene Symbol: tfip11
Previous Names: fd15a02, wu:fd15a02, zgc:86644 (1)
Location: Chr: 23   Details
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6893704]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  unspecified
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Mutant lines: 1 genotype
Alleles: sa17454, sa3219
PHENOTYPE
Data: Fig. 1 from Busch-Nentwich et al., 2012
Observed in: central nervous system, eye, hindbrain, inner ear (all 5) expand
GENE ONTOLOGY
Ontology GO Term
Biological Process RNA splicing (more)
Cellular Component spliceosomal complex (more)
Molecular Function DNA binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000467 (1)
  • InterPro:IPR022159 (1)
  • InterPro:IPR022783 (1)
  • InterPro:IPR024933 (1)
  • PROSITE:PS50174 (1)
  • Pfam:PF01585 (1)
  • Pfam:PF07842 (1)
  • Pfam:PF12457 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tfip11-001 (1) 2739
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM tfip11 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    tfip11 Contained in: [BAC] CH211-248G18 (1) (order this)
    tfip11 Encodes: [EST] fd15a02, IMAGE:6893704 (1) (order this)
    [cDNA] MGC:86644 (1) (order this), MGC:113896 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002721 (1) 2769 bp
    Genomic GenBank:CR381647 (1) 179855 bp
    Select Tool
    Polypeptide UniProtKB:F1QQ02 (1) 832 aa
    Sequence Clusters UniGene:7492 (1)
    Sequence Information (all 17)
    OTHER tfip11 GENE PAGES
  • Gene:436994 (1)
  • VEGA:OTTDARG00000028119 (1)
  • Ensembl(Zv9):ENSDARG00000056932 (1)
  • ORTHOLOGY No data available
    CITATIONS (17)