ZFIN ID: ZDB-GENE-040718-471
Gene Name: allantoicase
Gene Symbol: allc
Sequence Ontology ID : SO:0000704

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Previous Names: si:ch211-284k10.3, zgc:91799

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have allantoicase activity; predicted to be involved in allantoin catabolic process and purine nucleobase metabolic process; orthologous to human ALLC (allantoicase).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:91799]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH allc HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH allc VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process allantoin catabolic process (more)
Cellular Component cellular_component (more)
Molecular Function allantoicase activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005164 (1)
  • InterPro:IPR008979 (1)
  • InterPro:IPR015908 (1)
  • Pfam:PF03561 (1)
  • EC:3.5.3.4 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA allc-001 (1) 1748
    allc-002 (1) 722
    ncRNA allc-003 (1) 920
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM allc No data available
    MARKER RELATIONSHIPS
    allcContained in: [BAC] CH211-284K10 (1) (order this)
    allcEncodes: [cDNA] MGC:91799 (1) (order this), MGC:191890 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002716 (1) 1768bp
    Genomic GenBank:BX276180 (1) 107893bp
    Select Tool
    Polypeptide UniProtKB:B2GQF5 (1) 395aa
    Sequence Clusters UniGene:89100 (1)
    Sequence Information (all 18)
    OTHER allc GENE PAGES
  • Alliance (1)
  • Gene:436989 (1)
  • VEGA:OTTDARG00000005707 (1)
  • Ensembl(GRCz11):ENSDARG00000042562 (2)
  • ORTHOLOGY for allc (Chr: 20)
    CITATIONS (20)