ZFIN ID: ZDB-GENE-040718-457
Gene Name: small nuclear ribonucleoprotein 27 (U4/U6.U5)
Gene Symbol: snrnp27    Nomenclature History

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Previous Name: zgc:92615 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to be involved in RNA splicing and mRNA processing. Predicted to localize to nucleus. Orthologous to human SNRNP27 (small nuclear ribonucleoprotein U4/U6.U5 subunit 27).
Genome Resources: Alliance (1),  Gene:436976 (1),  Ensembl(GRCz11):ENSDARG00000035625 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:92615]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH snrnp27 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH snrnp27 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process mRNA processing (more)
Cellular Component nucleus (more)
Molecular Function molecular_function (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA snrnp27-201 (1)    Ensembl 931
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM snrnp27 No data available
MARKER RELATIONSHIPS
snrnp27 Contained in: [BAC] DKEY-202N14 (1) (order this)
snrnp27 Encodes: [cDNA] MGC:92615 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001002703 (1) 995 nt
Genomic GenBank:BX322550 (1) 184426 nt
Select Tool
Polypeptide UniProtKB:Q6DH74 (1) 158 aa
Sequence Information (all 9)
ORTHOLOGY for snrnp27 ( Chr: 5 )
CITATIONS (23)