header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040718-403
Gene Name: ataxin 7-like 2b
Gene Symbol: atxn7l2b
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: atxn7l2, wu:fi36e12, zgc:92454

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Orthologous to human ATXN7L2 (ataxin 7 like 2).
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:113874]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa38689 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atxn7l2b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atxn7l2b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013243 (1)
  • PROSITE:PS51505 (1)
  • Pfam:PF08313 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atxn7l2b-201 (1) 2337
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atxn7l2b No data available
    MARKER RELATIONSHIPS
    atxn7l2b Contained in: [BAC] CH211-199O1 (1) (order this), RP71-15H20 (1) (order this)
    atxn7l2b Encodes: [EST] fi36e12
    [cDNA] MGC:92454 (1) (order this), MGC:113874 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002655 (1) 2300 bp
    Genomic GenBank:AL773601 201299 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A5PMH0 (1) 666 aa
    Sequence Clusters UniGene:69449 (1)
    Sequence Information (all 16)
    ORTHOLOGY for atxn7l2b ( Chr: 8 )
    CITATIONS (19)