ZFIN ID: ZDB-GENE-040718-369
Gene Name: claudin 11a
Gene Symbol: cldn11a    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:92247

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have structural molecule activity. Predicted to be involved in bicellular tight junction assembly and cell adhesion. Predicted to localize to bicellular tight junction and plasma membrane. Is expressed in vascular endothelium. Orthologous to human CLDN11 (claudin 11).
Genome Resources: Alliance (1),  Gene:436897 (1),  Ensembl(GRCz11):ENSDARG00000020031 (2)
GENE EXPRESSION
All Expression Data: Fig. 4 from Cannon et al., 2013
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa19766 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45104 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-cldn11a N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cldn11a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cldn11a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process bicellular tight junction assembly (more)
    Cellular Component bicellular tight junction (more)
    Molecular Function structural molecule activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cldn11a-201 (1)    Ensembl 1316
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cldn11a No data available
    MARKER RELATIONSHIPS
    cldn11a Contained in: [BAC] CH211-152D1 (1)
    cldn11a Encodes: [cDNA] MGC:92247 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001002624 (1) 1290 nt
    Genomic GenBank:CR450771 (1) 152893 nt
    Select Tool
    Polypeptide UniProtKB:Q6DHL0 (1) 215 aa
    Sequence Information (all 8)
    ORTHOLOGY for cldn11a ( Chr: 2 )
    CITATIONS (23)