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ZIRC
ZFIN ID: ZDB-GENE-040718-357
Gene Name: nuclear receptor binding factor 2b
Gene Symbol: nrbf2b
Sequence Ontology ID : SO:0001217

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Previous Names: nrbf2, fm80e07, wu:fb26d03, wu:fm80e07, zgc:92273

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in autophagy. Is expressed in hindbrain neural keel and rhombomere. Orthologous to human NRBF2 (nuclear receptor binding factor 2).
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [IMAGE:7162841]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH nrbf2b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH nrbf2b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process autophagy (more)
GO Terms (all 1)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR015056 (1)
  • InterPro:IPR033393 (1)
  • InterPro:IPR039679 (1)
  • Pfam:PF08961 (1)
  • Pfam:PF17169 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA nrbf2b-002 (1) 317
    mRNA nrbf2b-201 (1) 2061
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nrbf2b No data available
    MARKER RELATIONSHIPS
    nrbf2b Contained in: [BAC] DKEY-204N14 (1) (order this)
    nrbf2b Encodes: [EST] fb26d03, fm80e07, IMAGE:7162841 (1) (order this)
    [cDNA] MGC:92273 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002613 (1) 2037 bp
    Genomic GenBank:CR450773 (1) 162078 bp
    Select Tool
    Polypeptide UniProtKB:Q6DHJ4 (1) 247 aa
    Sequence Clusters UniGene:33416 (1)
    Sequence Information (all 14)
    ORTHOLOGY for nrbf2b ( Chr: 12 )
    CITATIONS (18)