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ZIRC
ZFIN ID: ZDB-GENE-040718-283
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Gene Name: TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Gene Symbol: taf11
Sequence Ontology ID : SO:0001217

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Previous Name: zgc:92784 (1)

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have transcription coactivator activity and transcription factor binding activity. Predicted to be involved in RNA polymerase II preinitiation complex assembly. Predicted to localize to  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:92784]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH taf11 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH taf11 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process transcription initiation from RNA polymerase II promoter (more)
Cellular Component nucleus (more)
Molecular Function protein heterodimerization activity (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006809 (1)
  • InterPro:IPR009072 (1)
  • Pfam:PF04719 (1)
    • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA taf11-004 (1) 886
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    mRNA taf11-201 (1) 919
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    taf11-202 (1) 2842
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    aberrant processed transcript taf11-203 (1) 828
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    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM taf11 No data available
    MARKER RELATIONSHIPS
    taf11 Contained in: [BAC] CH73-90N13 (1) (order this)
    taf11 Encodes: [cDNA] MGC:92784 (1) (order this), MGC:174373 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002548 (1) 944 bp
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    Genomic GenBank:CU469313 (1) 106911 bp
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    Polypeptide UniProtKB:A8KBY5 (1) 206 aa
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    Sequence Clusters UniGene:83629 (1)
    Sequence Information (all 18)
    OTHER taf11 GENE PAGES
  • Alliance (1)
  • Gene:436821 (1)
  • VEGA:OTTDARG00000030393 (1)
  • Ensembl(GRCz11):ENSDARG00000037855 (2)
    • ORTHOLOGY for taf11 ( Chr: 23 )
    CITATIONS (17)