ZFIN ID: ZDB-GENE-040718-282
Gene Name: proteasome inhibitor subunit 1
Gene Symbol: psmf1    Nomenclature History

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Previous Name: zgc:92785 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to be involved in ubiquitin-dependent protein catabolic process. Orthologous to human PSMF1 (proteasome inhibitor subunit 1).
Genome Resources: Alliance (1),  Gene:436820 (1),  Ensembl(GRCz11):ENSDARG00000022652 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:92785]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7157723]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13126 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15640 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20820 Point Mutation Unknown Missense, Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    TALEN1-psmf1
    1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH psmf1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH psmf1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ubiquitin-dependent protein catabolic process (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR013886 PI31 proteasome regulator, C-terminal
    Domain IPR021625 PI31 proteasome regulator, N-terminal
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA psmf1-201 (1)    Ensembl 1286
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM psmf1 No data available
    MARKER RELATIONSHIPS
    psmf1 Contained in: [BAC] DKEY-107I16 (1) (order this)
    psmf1 Encodes: [EST] IMAGE:7157723 (1)
    [cDNA] MGC:92785 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002547 (1) 1210 bp
    Genomic GenBank:BX001037 (1) 92347 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4II16 (1) 272 aa
    Sequence Information (all 12)
    ORTHOLOGY for psmf1 ( Chr: 6 )
    CITATIONS (21)