ZFIN ID: ZDB-GENE-040718-267
Gene Name: NOP16 nucleolar protein homolog (yeast)
Gene Symbol: nop16
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:92910 (1)

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in ribosomal large subunit biogenesis; predicted to localize to the nucleolus; orthologous to human NOP16 (NOP16 nucleolar protein).
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (24 images) from Thisse et al., 2004 [MGC:92910]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH nop16 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH nop16 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process ribosomal large subunit biogenesis (more)
Cellular Component nucleus (more)
Molecular Function molecular_function (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019002 (1)
  • Pfam:PF09420 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nop16-201 (1) 880
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nop16 No data available
    MARKER RELATIONSHIPS
    nop16Contained in: [BAC] CH211-153M12 (1) (order this), DKEY-29J9 (1) (order this)
    nop16Encodes: [cDNA] MGC:92910 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002534 (1) 838bp
    Genomic GenBank:BX927237 (1) 208942bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q6DGI3 (1) 171aa
    Sequence Clusters UniGene:83130 (1)
    Sequence Information (all 11)
    OTHER nop16 GENE PAGES
  • Alliance (1)
  • Gene:436807 (1)
  • VEGA:OTTDARG00000022610 (1)
  • Ensembl(GRCz11):ENSDARG00000044402 (2)
  • ORTHOLOGY for nop16 (Chr: 21)
    CITATIONS (19)