ZFIN ID: ZDB-GENE-040718-216
Gene Name: RAB interacting factor
Gene Symbol: rabif    Nomenclature History

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Previous Names: wu:fc54e04, zgc:92821

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have guanyl-nucleotide exchange factor activity and zinc ion binding activity. Predicted to be involved in post-Golgi vesicle-mediated transport. Predicted to localize to cytosol and membrane. Orthologous to human RABIF (RAB interacting factor).
Genome Resources: Alliance (1),  Gene:436784 (1),  Ensembl(GRCz11):ENSDARG00000002690 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7148134]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la017784Tg Transgenic Insertion Unknown Unknown DNA
sa45428 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rabif HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rabif VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process small GTPase mediated signal transduction (more)
    Cellular Component cytosol (more)
    Molecular Function guanyl-nucleotide exchange factor activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA rabif-201 (1)    Ensembl 1062
    rabif-202 (1)    Ensembl 879
    rabif-203 (1)    Ensembl 557
    rabif-204 (1)    Ensembl 793
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rabif No data available
    MARKER RELATIONSHIPS
    rabif Contained in: [BAC] CH211-137O16 (1)
    rabif Encodes: [EST] fc54e04, IMAGE:7148134 (1)
    [cDNA] MGC:92821 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001168213 (1) 1048 nt
    Genomic GenBank:CR628365 (1) 191036 nt
    Select Tool
    Polypeptide UniProtKB:F1QVW4 (1) 163 aa
    Sequence Information (all 17)
    ORTHOLOGY for rabif ( Chr: 11 )
    CITATIONS (24)