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ZIRC
ZFIN ID: ZDB-GENE-040718-214
Gene Name: SPT4 homolog, DSIF elongation factor subunit
Gene Symbol: supt4h1    Nomenclature History

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Previous Name: zgc:92824

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have RNA polymerase II complex binding activity and single-stranded RNA binding activity. Predicted to be involved in chromatin organization. Predicted to localize to the DSIF complex. Orthologous to human SUPT4H1 (SPT4 homolog, DSIF elongation factor subunit).
Genome Resources: Alliance (1), Gene:436782 (1), Ensembl(GRCz11):ENSDARG00000113969 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:92824]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa40350 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH supt4h1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH supt4h1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of DNA-templated transcription, elongation (more)
    Cellular Component DSIF complex (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 10)
    TRANSCRIPTS No data available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM supt4h1No data available
    MARKER RELATIONSHIPS
    supt4h1Encodes: [cDNA] MGC:92824 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002509 (1)
    Genomic GenBank:CABZ01076731 (1) 25427bp
    Select Tool
    Polypeptide UniProtKB:Q6DGQ0 (1) 117aa
    Sequence Clusters UniGene:79365 (1)
    Sequence Information (all 12)
    ORTHOLOGY for supt4h1 (Chr: 5)
    CITATIONS (19)