ZFIN ID: ZDB-GENE-040718-204
Gene Name: OTU deubiquitinase, ubiquitin aldehyde binding 1b
Gene Symbol: otub1b
Sequence Ontology ID : SO:0000704

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Previous Names: otub1, fa19h07, wu:fa19h07 (1), zgc:92839

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have NEDD8-specific protease activity, thiol-dependent ubiquitin-specific protease activity, and ubiquitin binding activity; predicted to be involved in protein K48-linked  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6902223]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa44660 Point Mutation Unknown Unknown ENU
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH otub1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH otub1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein deubiquitination (more)
Cellular Component nucleus (more)
Molecular Function cysteine-type peptidase activity (more)
GO Terms (all 11)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003323 (1)
  • InterPro:IPR016615 (1)
  • InterPro:IPR019400 (1)
  • InterPro:IPR030298 (1)
  • InterPro:IPR038765 (1)
  • PROSITE:PS50802 (1)
  • Pfam:PF10275 (1)
  • EC:3.4.19.12 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA otub1b-201 (1) 1196
    otub1b-202 (1) 744
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM otub1b No data available
    MARKER RELATIONSHIPS
    otub1bContained in: [BAC] CH211-226L4 (1) (order this)
    otub1bEncodes: [EST] fa19h07, IMAGE:6902223 (1) (order this)
    [cDNA] MGC:92839 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002500 (1) 1188bp
    Genomic GenBank:BX511061 (1) 200880bp Blast at MegaBLAST
    Polypeptide UniProtKB:F6P1A9 (1) 266aa
    Sequence Clusters UniGene:32713 (1)
    Sequence Information (all 15)
    OTHER otub1b GENE PAGES
  • Alliance (1)
  • Gene:436773 (1)
  • VEGA:OTTDARG00000027362 (1)
  • Ensembl(GRCz11):ENSDARG00000011462 (2)
  • ORTHOLOGY for otub1b (Chr: 7)
    CITATIONS (24)