ZFIN ID: ZDB-GENE-040718-185
Gene Name: trafficking protein particle complex 5
Gene Symbol: trappc5    Nomenclature History

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Previous Names: wu:fc34a11, zgc:92866 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to contribute to Rab guanyl-nucleotide exchange factor activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to localize to the TRAPPI protein complex; TRAPPII protein complex; and TRAPPIII protein complex. Orthologous to human TRAPPC5 (trafficking protein particle complex 5).
Genome Resources: Alliance (1),  Gene:436755 (1),  Ensembl(GRCz11):ENSDARG00000026068 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6906727]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH trappc5 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH trappc5 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process Golgi vesicle transport (more)
Cellular Component endoplasmic reticulum (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Family IPR007194 Transport protein particle (TRAPP) component
Family IPR016696 TRAPP I complex, subunit 5
Homologous_superfamily IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA trappc5-201 (1)    Ensembl 1217
trappc5-202 (1)    Ensembl 929
trappc5-203 (1)    Ensembl 990
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM trappc5 No data available
MARKER RELATIONSHIPS
trappc5 Contained in: [BAC] CH211-214C7 (1)
trappc5 Encodes: [EST] fc34a11, IMAGE:6906727 (1)
[cDNA] MGC:92866 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001002482 (1) 1225 nt
Genomic GenBank:BX511120 (1) 204893 nt Blast at MegaBLAST
Polypeptide UniProtKB:Q6DGL5 (1) 188 aa
Sequence Information (all 12)
ORTHOLOGY for trappc5 ( Chr: 1 )
CITATIONS (23)