ZFIN ID: ZDB-GENE-040718-176
Gene Name: lactate dehydrogenase Bb
Gene Symbol: ldhbb
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:92882 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have L-lactate dehydrogenase activity; predicted to be involved in carbohydrate metabolic process, carboxylic acid metabolic process, and oxidation-reduction process; predicted to  ...
GENE EXPRESSION
All Expression Data: 9 figures from 2 publications
Directly Submitted Expression Data: 7 figures (5 images) from Thisse et al., 2004 [MGC:92882]
Wild-type Stages, Structures: Pharyngula:High-pec (42.0h-48.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa44214 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ldhbb HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    [Lactate dehydrogenase-B deficiency] 614128
    [Lactate dehydrogenase-B deficiency] 614128
    DISEASE ASSOCIATED WITH ldhbb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process carbohydrate metabolic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function catalytic activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001236 (1)
  • InterPro:IPR001557 (1)
  • InterPro:IPR011304 (1)
  • InterPro:IPR015955 (1)
  • InterPro:IPR018177 (1)
  • InterPro:IPR022383 (1)
  • InterPro:IPR036291 (1)
  • PROSITE:PS00064 (1)
  • Pfam:PF00056 (1)
  • Pfam:PF02866 (1)
  • EC:1.1.1.27 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA ldhbb-004 (1) 561
    mRNA ldhbb-201 (1) 1636
    ldhbb-202 (1) 517
    ldhbb-203 (1) 923
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ldhbb No data available
    MARKER RELATIONSHIPS
    ldhbbContained in: [BAC] CH211-267N3 (1) (order this)
    ldhbbEncodes: [cDNA] MGC:92882 (1) (order this), MGC:192374 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002474 (1) 1618bp
    Genomic GenBank:CR855322 (1) 140318bp
    Select Tool
    Polypeptide UniProtKB:B2GRW6 (1) 334aa
    Sequence Clusters UniGene:108356 (1)
    Sequence Information (all 24)
    OTHER ldhbb GENE PAGES
  • Alliance (1)
  • Gene:436747 (1)
  • VEGA:OTTDARG00000028447 (1)
  • Ensembl(GRCz11):ENSDARG00000071076 (2)
  • ORTHOLOGY for ldhbb (Chr: 25)
    CITATIONS (24)