ZFIN ID: ZDB-GENE-040718-174
Gene Name: ATPase, Ca++ transporting, plasma membrane 3a
Gene Symbol: atp2b3a

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Previous Names: atp2b3, pmca3a (1), zgc:92885 (1)

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 6 figures (8 images) from Thisse et al., 2004 [MGC:92885]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Adult (90d-730d, breeding adult)
  blood, brain, central nervous system, cranial ganglion (all 14) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la016259Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa2421 Point Mutation Unknown Premature Stop ENU
    sa10745 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18912 Point Mutation Unknown Splice Site ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atp2b3a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Spinocerebellar ataxia, X-linked 1 302500
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process calcium ion transmembrane transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function ATP binding (more)
    GO Terms (all 15)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001757 (1)
  • InterPro:IPR004014 (1)
  • InterPro:IPR006068 (1)
  • InterPro:IPR006408 (1)
  • InterPro:IPR008250 (1)
  • InterPro:IPR018303 (1)
  • InterPro:IPR022141 (1)
  • InterPro:IPR023214 (1)
  • InterPro:IPR023298 (1)
  • InterPro:IPR023299 (1)
  • PROSITE:PS00154 (1)
  • Pfam:PF00122 (1)
  • Pfam:PF00689 (1)
  • Pfam:PF00690 (1)
  • Pfam:PF08282 (1)
  • Pfam:PF12424 (1)
  • EC:3.6.3.8 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp2b3a-001 (1) 4671
    atp2b3a-002 (1) 3635
    ncRNA atp2b3a-003 (1) 756
    mRNA atp2b3a-004 (1) 901
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atp2b3a No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    atp2b3aContained in: [BAC] CH211-229N2 (1) (order this), DKEYP-110G5 (1)
    atp2b3aEncodes: [cDNA] MGC:92885 (1) (order this)
    atp2b3aHas Artifact: [EST] fk54d07
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002472 (1) 3965bp
    Genomic GenBank:CT025854 (1) 184858bp
    Select Tool
    Polypeptide UniProtKB:F1R2R5 (1) 1299aa
    Sequence Clusters UniGene:81961 (1)
    Sequence Information (all 31)
    OTHER atp2b3a GENE PAGES
  • Gene:436745 (1)
  • VEGA:OTTDARG00000022120 (1)
  • Ensembl(GRCz10):ENSDARG00000043474 (1)
  • ORTHOLOGY for atp2b3a (Chr: 8)
    Species Symbol Chromosome Accession # Evidence
    Human ATP2B3 X
  • Gene:492
  • OMIM:300014
  • HGNC:816
  • Amino acid sequence comparison (2)
    Conserved genome location (synteny) (1)
    Mouse Atp2b3 X
  • MGI:1347353
  • Gene:320707
  • Amino acid sequence comparison (2)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (24)