ZFIN ID: ZDB-GENE-040718-156
Gene Name: SET domain containing 7, histone lysine methyltransferase
Gene Symbol: setd7    Nomenclature History

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Previous Names: set7 (1), zgc:101860 (1), zgc:92330

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have histone-lysine N-methyltransferase activity. Involved in heart morphogenesis. Predicted to localize to chromosome and nucleus. Is expressed in heart; heart tube; lens; and somite. Orthologous to human SETD7 (SET domain containing 7, histone lysine methyltransferase).
Genome Resources: Alliance (1),  Gene:436729 (1),  Ensembl(GRCz11):ENSDARG00000038858 (2)
GENE EXPRESSION
All Expression Data: 8 figures from 4 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:101860]
  3 figures (2 images) from Thisse et al., 2004 [IMAGE:7152055]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihby1 Insertion Exon 1 Unknown CRISPR
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
CRISPR1-setd7
2
CRISPR2-setd7
2
CRISPR3-setd7 1
MO1-setd7 N/A 1
MO2-setd7 N/A 1
DISEASE ASSOCIATED WITH setd7 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH setd7 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process heart morphogenesis (more)
Cellular Component chromosome (more)
Molecular Function histone-lysine N-methyltransferase activity (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA setd7-201 (1)    Ensembl 1977
ncRNA setd7-002 (1)    Ensembl 1038
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM setd7 No data available
MARKER RELATIONSHIPS
setd7 Contained in: [BAC] CH211-113D11 (1)
setd7 Encodes: [EST] IMAGE:7152055 (1)
[cDNA] MGC:92330 (1), MGC:101860 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001002456 (1) 1972 nt
Genomic GenBank:BX005077 (1) 127560 nt
Select Tool
Polypeptide UniProtKB:F1QXL2 (1) 373 aa
Sequence Information (all 17)
ORTHOLOGY for setd7 ( Chr: 14 )
CITATIONS (34)