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ZIRC
ZFIN ID: ZDB-GENE-040715-8
Gene Name: nucleoporin 205
Gene Symbol: nup205
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:111802

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be a structural constituent of nuclear pore. Predicted to be involved in nuclear pore organization. Predicted to localize to the nuclear pore inner ring. Human ortholog(s) of this gene  ...
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi557Tg Transgenic Insertion Intron 1 Unknown DNA
hi2352Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • hi2720Tg Transgenic Insertion Unknown Unknown DNA
    hi2992Tg Transgenic Insertion Intron 1 Unknown DNA
    sa6122 Point Mutation Unknown Premature Stop ENU
    sa6504 Point Mutation Unknown Splice Site ENU
    sa14979 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25054 Point Mutation Unknown Premature Stop ENU
    sa43058 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43059 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43060 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE
    Data: 5 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH nup205 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    nephrotic syndrome type 13 ?Nephrotic syndrome, type 13 616893
    DISEASE ASSOCIATED WITH nup205 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process nuclear pore organization (more)
    Cellular Component nuclear pore (more)
    Molecular Function structural constituent of nuclear pore (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR021827 (1)
  • Pfam:PF11894 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nup205-203 (1) 6006
    nup205-204 (1) 6109
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nup205 No data available
    MARKER RELATIONSHIPS
    nup205Contained in: [BAC] CH211-141E22 (1) (order this), CH211-269A1 (1) (order this), DKEY-57M7 (1) (order this)
    nup205Encodes: [cDNA] MGC:111802 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003859 (1) 6009bp
    Genomic GenBank:CR293524 190196bp
    Select Tool
    Polypeptide UniProtKB:Q1L8Z1 (1) 2001aa
    Sequence Clusters UniGene:31864 (1)
    Sequence Information (all 28)
    ORTHOLOGY for nup205 (Chr: 18)
    CITATIONS (23)