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ZIRC
ZFIN ID: ZDB-GENE-040704-63
Gene Name: nuclear factor, interleukin 3 regulated, member 6
Gene Symbol: nfil3-6
Sequence Ontology ID : SO:0001217

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Previous Names: e4bp4-6 (1), zgc:103704, zgc:77060

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity. Involved in circadian regulation of gene expression and regulation of transcription, DNA-templated. Predicted to localize to the nucleus.  ...
GENE EXPRESSION
All Expression Data: 13 figures from 5 publications
Directly Submitted Expression Data: 7 figures (13 images) from Thisse et al., 2004 [MGC:103704]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9374 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nfil3-6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nfil3-6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process circadian regulation of gene expression (more)
    Cellular Component nucleus (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004827 (1)
  • PROSITE:PS00036 (1)
  • PROSITE:PS50217 (1)
  • Pfam:PF07716 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nfil3-6 No data available
    MARKER RELATIONSHIPS
    nfil3-6 Encodes: [cDNA] MGC:77060 (1) (order this), MGC:103704 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002218 (1) 4650 bp
    Genomic GenBank:AL935164 (1) 170509 bp
    Select Tool
    Polypeptide UniProtKB:E2E3G0 (1) 350 aa
    Sequence Clusters UniGene:81949 (1)
    Sequence Information (all 21)
    OTHER nfil3-6 GENE PAGES
  • Alliance (1)
  • Gene:431765 (1)
  • Ensembl(GRCz11):ENSDARG00000087188 (2)
  • ORTHOLOGY for nfil3-6 ( Chr: 3 )
    CITATIONS (27)