Gene

ppp1r42

ID

ZDB-GENE-040704-43

Name

protein phosphatase 1, regulatory subunit 42

Symbol

ppp1r42 Nomenclature History

Previous Names

lrrc67
zgc:91834 (1)

Type

protein_coding_gene

Location

Chr: 24 Mapping Details/Browsers

Description

Predicted to have actin binding activity; dynein complex binding activity; and tubulin binding activity. Predicted to localize to centrosome and manchette. Orthologous to human PPP1R42 (protein phosphatase 1 regulatory subunit 42).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:91834 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ppp1r42 Human Ortholog

No data available

Associated With ppp1r42 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Homologous_superfamily	IPR032675	Leucine-rich repeat domain superfamily
Repeat	IPR001611	Leucine-rich repeat

Domain Details Per Protein

Protein	Length	Leucine-rich repeat	Leucine-rich repeat domain superfamily
UniProtKB:Q6GQN5 InterPro	329
UniProtKB:A0A8M3AP70 InterPro	290

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ppp1r42-201 (1) Ensembl	Havana	1554 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations