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ZIRC
ZFIN ID: ZDB-GENE-040704-41
Gene Name: TruB pseudouridine (psi) synthase family member 2
Gene Symbol: trub2
Sequence Ontology ID : SO:0000704

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Previous Names: fc51e05, wu:fc51e05 (1), zgc:91836 (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity and pseudouridine synthase activity. Predicted to be involved in RNA processing and pseudouridine synthesis. Orthologous to human TRUB2 (TruB pseudouridine  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:91836]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2286 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH trub2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH trub2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process pseudouridine synthesis (more)
Molecular Function pseudouridine synthase activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002501 (1)
  • InterPro:IPR020103 (1)
  • InterPro:IPR039048 (1)
  • Pfam:PF01509 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA trub2-002 (1) 639
    mRNA trub2-201 (1) 1318
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM trub2 No data available
    MARKER RELATIONSHIPS
    trub2Contained in: [BAC] CH211-10E8 (order this)
    trub2Encodes: [EST] fc51e05
    [cDNA] MGC:91836 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002200 (1) 1290bp
    Genomic GenBank:AL732598 (1) 88982bp
    Select Tool
    Polypeptide UniProtKB:F6P6I4 (1) 352aa
    Sequence Clusters UniGene:78123 (1)
    Sequence Information (all 16)
    ORTHOLOGY for trub2 (Chr: 6)
    CITATIONS (16)