ZFIN ID: ZDB-GENE-040704-39
Gene Name: BTB (POZ) domain containing 9
Gene Symbol: btbd9    Nomenclature History

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Previous Names: wu:fd16d11, zgc:91846

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Involved in brain development. Orthologous to human BTBD9 (BTB domain containing 9).
Genome Resources: Alliance (1),  Gene:557659 (1),  Ensembl(GRCz11):ENSDARG00000068983 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:91846]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31963 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35580 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-btbd9 N/A 1
    DISEASE ASSOCIATED WITH btbd9 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH btbd9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process brain development (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000210 BTB/POZ domain
    Domain IPR000421 Coagulation factor 5/8 C-terminal domain
    Homologous_superfamily IPR008979 Galactose-binding-like domain superfamily
    Homologous_superfamily IPR011333 SKP1/BTB/POZ domain superfamily
    Domain IPR011705 BTB/Kelch-associated
    Domain IPR034091 BTBD9, BACK-like domain
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA btbd9-201 (1)    Ensembl 2266
    btbd9-202 (1)    Ensembl 775
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM btbd9 No data available
    MARKER RELATIONSHIPS
    btbd9 Contained in: [BAC] CH211-101N16 (1), DKEYP-2E4 (1)
    btbd9 Encodes: [EST] fd16d11
    [cDNA] MGC:91846 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002198 (1) 2253 bp
    Genomic GenBank:CT573277 (1) 207535 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QLH3 (1) 602 aa
    Sequence Information (all 17)
    ORTHOLOGY for btbd9 ( Chr: 13 )
    CITATIONS (19)