ZFIN ID: ZDB-GENE-040702-6
Gene Name: nuclear receptor subfamily 5, group A, member 1b
Gene Symbol: nr5a1b
Sequence Ontology ID : SO:0000704

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Previous Names: nr5a2l, SF1-B (1), ff1d (1)

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 15 figures from 7 publications
Directly Submitted Expression Data: 6 figures (13 images) from Thisse et al., 2008 [ay212920]
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Adult (90d-730d, breeding adult)
  brain, central nervous system, diencephalon, heart (all 10) expand
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH nr5a1b HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
46 XY gonadal dysgenesis 46XY sex reversal 3 612965
azoospermia Spermatogenic failure 8 613957
premature ovarian failure Premature ovarian failure 7 612964
Adrenocortical insufficiency
GENE ONTOLOGY
Ontology GO Term
Biological Process phosphorylation (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 21)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000536 (1)
  • InterPro:IPR001628 (1)
  • InterPro:IPR001723 (1)
  • InterPro:IPR013088 (1)
  • InterPro:IPR016355 (1)
  • InterPro:IPR035500 (1)
  • PROSITE:PS00031 (1)
  • PROSITE:PS51030 (1)
  • Pfam:PF00104 (1)
  • Pfam:PF00105 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nr5a1b-001 (1) 2555
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nr5a1b No data available
    MARKER RELATIONSHIPS
    nr5a1bContained in: [BAC] CH73-57C17 (1) (order this), CH73-385P1 (1) (order this), CH211-167P9 (order this)
    nr5a1bEncodes: [EST] ay212920 (2) (order this)
    [cDNA] MGC:193828 (1) (order this), MGC:193844 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212834 (1) 2554bp
    Genomic GenBank:AL772368 162620bp
    Select Tool
    Polypeptide UniProtKB:Q800U8 (1) 502aa
    Sequence Clusters UniGene:30454 (1)
    Sequence Information (all 18)
    OTHER nr5a1b GENE PAGES
  • Alliance (1)
  • Gene:405759 (1)
  • VEGA:OTTDARG00000032604 (1)
  • Ensembl(GRCz10):ENSDARG00000023362 (1)
  • ORTHOLOGY for nr5a1b (Chr: 21)
    CITATIONS (35)