ZFIN ID: ZDB-GENE-040628-4
Gene Name: brain-specific homeobox
Gene Symbol: bsx    Nomenclature History

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Gene Type: protein_coding_gene
Location: Chr: 10 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in pineal gland development. Predicted to localize to nucleus. Is expressed in forebrain. Orthologous to human BSX (brain specific homeobox).
Genome Resources: Alliance (1),  Gene:573364 (1),  Ensembl(GRCz11):ENSDARG00000068976 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
m1376 Indel Unknown Frameshift, Premature Stop TALEN
sa10675 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41686 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-bsx N/A 1
    MO2-bsx N/A 1
    TALEN1-bsx 1
    DISEASE ASSOCIATED WITH bsx HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH bsx VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process pineal gland development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA bsx-201 (1)    Ensembl 977
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM bsx No data available
    MARKER RELATIONSHIPS
    bsx Contained in: [BAC] RP71-56I13 (1)
    bsx Encodes: [cDNA] MGC:193707 (1), MGC:193746 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_214727 (1) 848 nt
    Genomic GenBank:BX120005 (1) 129782 nt
    Select Tool
    Polypeptide UniProtKB:Q1LY36 (1) 227 aa
    Sequence Information (all 16)
    ORTHOLOGY for bsx ( Chr: 10 )
    CITATIONS (26)