Gene

lsm6

ID
ZDB-GENE-040625-50
Name
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Symbol
lsm6 Nomenclature History
Previous Names
  • zgc:92379
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to have RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome and maturation of SSU-rRNA. Predicted to localize to several cellular components, including P-body; small nucleolar ribonucleoprotein complex; and spliceosomal snRNP complex. Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Genome Resources
Note
None
Expression
All Expression Data
1 figure from Iwanami et al., 2016
Cross-Species Comparison
High Throughput Data
No data available
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With lsm6 Human Ortholog
No data available
Associated With lsm6 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001163 LSM domain, eukaryotic/archaea-type
Family IPR016487 Sm-like protein Lsm6/SmF
Homologous_superfamily IPR010920 LSM domain superfamily
Domain Details Per Protein
Protein Length LSM domain, eukaryotic/archaea-type LSM domain superfamily Sm-like protein Lsm6/SmF
UniProtKB:Q6IMW9 80
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Gene Tree
Ensembl
Citations