ZFIN ID: ZDB-GENE-040625-112
Gene Name: ribokinase
Gene Symbol: rbks    Nomenclature History

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Previous Name: zgc:86813

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to have ATP binding activity; metal ion binding activity; and ribokinase activity. Predicted to be involved in D-ribose catabolic process and carbohydrate phosphorylation. Predicted to localize to cytoplasm and nucleus. Orthologous to human RBKS (ribokinase).
Genome Resources: Alliance (1),  Gene:415207 (1),  Ensembl(GRCz11):ENSDARG00000019877 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6901380]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1915 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rbks HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rbks VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process carbohydrate metabolic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function ATP binding (more)
    GO Terms (all 14)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA rbks-201 (1)    Ensembl 1250
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rbks No data available
    MARKER RELATIONSHIPS
    rbks Contained in: [BAC] DKEY-16J16 (1) (order this)
    rbks Encodes: [EST] IMAGE:6901380 (1)
    [cDNA] MGC:86813 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001002117 (1) 1252 nt
    Genomic GenBank:BX324135 (1) 229936 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1RCK7 (1) 311 aa
    Sequence Information (all 10)
    ORTHOLOGY for rbks ( Chr: 17 )
    CITATIONS (24)