ZFIN ID: ZDB-GENE-040513-5
Gene Name: acid-sensing (proton-gated) ion channel family member 4a
Gene Symbol: asic4a

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Previous Names: accn4a, zASIC4.1 (1)

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
  gill, retinal ganglion cell layer, retinal photoreceptor layer, whole organism
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa7173 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH asic4a HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process ion transport (more)
Cellular Component integral component of plasma membrane (more)
Molecular Function ligand-gated sodium channel activity (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001873 (1)
  • InterPro:IPR020903 (1)
  • PROSITE:PS01206 (1)
  • Pfam:PF00858 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA asic4a-001 (1) 1446
    asic4a-002 (1) 813
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM asic4a No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    asic4aContained in: [BAC] DKEY-22P6 (1) (order this), DKEY-31N3 (1) (order this), DKEY-244H12 (1) (order this)
    [Fosmid] CH1073-64G16 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_214787 (1) 2285bp
    Genomic GenBank:CU570898 (1) 158863bp
    Select Tool
    Polypeptide UniProtKB:F1QRF3 (1) 539aa
    Sequence Clusters UniGene:91508 (1)
    Sequence Information (all 16)
    OTHER asic4a GENE PAGES
  • Gene:407668 (1)
  • VEGA:OTTDARG00000025530 (1)
  • Ensembl(GRCz10):ENSDARG00000025162 (1)
  • ORTHOLOGY for asic4a (Chr: 9)
    Species Symbol Chromosome Accession # Evidence
    Human ASIC4 2
  • Gene:55515
  • OMIM:606715
  • HGNC:21263
  • Amino acid sequence comparison (2)
    Conserved genome location (synteny) (1)
    Mouse Asic4 1
  • MGI:2652846
  • Gene:241118
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (18)