ZFIN ID: ZDB-GENE-040426-980
Gene Name: programmed cell death 5
Gene Symbol: pdcd5    Nomenclature History

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Previous Name: zgc:56315 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to have DNA binding activity. Predicted to localize to cytosol and nucleus. Orthologous to human PDCD5 (programmed cell death 5).
Genome Resources: Alliance (1),  Gene:394152 (1),  Ensembl(GRCz11):ENSDARG00000026072 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56315]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la013261Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18058 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa29054 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pdcd5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pdcd5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cytosol (more)
    Molecular Function DNA binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pdcd5-201 (1)    Ensembl 1010
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pdcd5 No data available
    MARKER RELATIONSHIPS
    pdcd5 Contained in: [BAC] CH211-220F20 (1)
    pdcd5 Encodes: [cDNA] MGC:56315 (1), MGC:86659 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_201177 (1) 993 nt
    Genomic GenBank:CR936382 (1) 78500 nt
    Select Tool
    Polypeptide UniProtKB:Q7ZUZ4 (1) 128 aa
    Sequence Information (all 11)
    ORTHOLOGY for pdcd5 ( Chr: 18 )
    CITATIONS (25)