ZFIN ID: ZDB-GENE-040426-976
Gene Name: ribonuclease H2, subunit A
Gene Symbol: rnaseh2a
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:56307

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7144748]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa375 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11134 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zko1010a Small Deletion Unknown Unknown CRISPR
    Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rnaseh2a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Aicardi-Goutieres syndrome Aicardi-Goutieres syndrome 4 610333
    DISEASE ASSOCIATED WITH rnaseh2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process RNA metabolic process (more)
    Cellular Component ribonuclease H2 complex (more)
    Molecular Function endonuclease activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001352 (1)
  • InterPro:IPR004649 (1)
  • InterPro:IPR012337 (1)
  • InterPro:IPR023160 (1)
  • InterPro:IPR024567 (1)
  • InterPro:IPR036397 (1)
  • Pfam:PF01351 (1)
  • EC:3.1.26.4 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rnaseh2a-001 (1) 1302
    aberrant processed transcript rnaseh2a-002 (1) 787
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rnaseh2a No data available
    MARKER RELATIONSHIPS
    rnaseh2aContained in: [BAC] CH211-44L19 (1) (order this), CH211-145G9 (1) (order this)
    rnaseh2aEncodes: [EST] IMAGE:7144748 (1) (order this)
    [cDNA] MGC:56307 (1) (order this), MGC:86695 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200226 (1) 1328bp
    Genomic GenBank:BX548032 (1) 161483bp
    Select Tool
    Polypeptide UniProtKB:Q6IQM9 (1) 307aa
    Sequence Clusters UniGene:14704 (1)
    Sequence Information (all 19)
    OTHER rnaseh2a GENE PAGES
  • Alliance (1)
  • Gene:393195 (1)
  • VEGA:OTTDARG00000019509 (1)
  • Ensembl(GRCz11):ENSDARG00000018891 (2)
  • ORTHOLOGY for rnaseh2a (Chr: 1)
    CITATIONS (24)