ZFIN is now using GRCz12tu for Genomic Data
Gene
trmt11
- ID
- ZDB-GENE-040426-953
- Name
- tRNA methyltransferase 11
- Symbol
- trmt11 Nomenclature History
- Previous Names
-
- zgc:56233 (1)
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable methyltransferase activity. Predicted to be involved in methylation and tRNA processing. Predicted to be active in cytoplasm. Orthologous to human TRMT11 (tRNA methyltransferase 11 homolog).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:56233 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Mishima et al., 2016
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR002052 | DNA methylase, N-6 adenine-specific, conserved site |
| Domain | IPR000241 | Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain |
| Family | IPR016691 | tRNA (guanine(10)-N(2))-methyltransferase, TRM11 |
| Homologous_superfamily | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | DNA methylase, N-6 adenine-specific, conserved site | Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain | S-adenosyl-L-methionine-dependent methyltransferase superfamily | tRNA (guanine(10)-N(2))-methyltransferase, TRM11 |
|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9PJB6 | InterPro | 431 | ||||
| UniProtKB:Q7T064 | InterPro | 466 | ||||
| UniProtKB:A0A8M1PGS2 | InterPro | 466 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
trmt11-201
(1)
|
Ensembl | 1,555 nt | ||
| mRNA |
trmt11-202
(1)
|
Ensembl | 1,397 nt | ||
| ncRNA |
trmt11-003
(1)
|
Ensembl | 869 nt | ||
| ncRNA |
trmt11-004
(1)
|
Ensembl | 1,082 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers