ZFIN ID: ZDB-GENE-040426-953
Gene Name: tRNA methyltransferase 11 homolog
Gene Symbol: trmt11    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:56233 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 16 Mapping Details/Browsers
Description: Predicted to have tRNA (guanine-N2-)-methyltransferase activity. Predicted to be involved in methylation. Predicted to localize to cytoplasm. Orthologous to human TRMT11 (tRNA methyltransferase 11 homolog).
Genome Resources: Alliance (1),  Gene:393185 (1),  Ensembl(GRCz11):ENSDARG00000040033 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56233]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2875 Point Mutation Unknown Premature Stop ENU
sa42790 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-trmt11 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH trmt11 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH trmt11 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process methylation (more)
    Cellular Component cytoplasm (more)
    Molecular Function methyltransferase activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA trmt11-201 (1)    Ensembl 1555
    trmt11-202 (1)    Ensembl 1397
    ncRNA trmt11-003 (1)    Ensembl 869
    trmt11-004 (1)    Ensembl 1082
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM trmt11 No data available
    MARKER RELATIONSHIPS
    trmt11 Contained in: [BAC] DKEY-29B11 (1) (order this)
    trmt11 Encodes: [cDNA] MGC:56233 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200216 (1) 1798 nt
    Genomic GenBank:CT025588 (1) 172821 nt
    Select Tool
    Polypeptide UniProtKB:F1R1R2 (1) 466 aa
    Sequence Information (all 15)
    ORTHOLOGY for trmt11 ( Chr: 16 )
    CITATIONS (20)