ZFIN ID: ZDB-GENE-040426-947
Gene Name: pre-mRNA processing factor 4Ba
Gene Symbol: prpf4ba    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:56223 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have protein kinase activity. Predicted to be involved in protein phosphorylation. Predicted to localize to the nucleus. Orthologous to human PRPF4B (pre-mRNA processing factor 4B).
Genome Resources: Alliance (1),  Gene:393182 (1),  Ensembl(GRCz11):ENSDARG00000008784 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56223]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH prpf4ba HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH prpf4ba VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein phosphorylation (more)
Cellular Component nucleus (more)
Molecular Function ATP binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR000719 Protein kinase domain
Active_site IPR008271 Serine/threonine-protein kinase, active site
Homologous_superfamily IPR011009 Protein kinase-like domain superfamily
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA prpf4ba-201 (1)    Ensembl 3153
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM prpf4ba No data available
MARKER RELATIONSHIPS
prpf4ba Contained in: [BAC] DKEY-71K24 (1) (order this), DKEY-154P10 (1) (order this)
prpf4ba Encodes: [cDNA] MGC:56223 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_200213 (1) 1882 bp
Genomic GenBank:BX323807 (1) 194313 bp
Select Tool
Polypeptide UniProtKB:B0V1K6 (1) 986 aa
Sequence Information (all 20)
ORTHOLOGY for prpf4ba ( Chr: 2 )
CITATIONS (18)