| ZFIN ID: ZDB-GENE-040426-947 |
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| Gene Name: | pre-mRNA processing factor 4Ba | |||||||||||||
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| Gene Symbol: | prpf4ba Nomenclature History |
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Attributions
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| Previous Name: | zgc:56223 (1) | |||||||||||||
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| Gene Type: | protein_coding_gene | |||||||||||||
| Location: | Chr: 2 Mapping Details/Browsers | |||||||||||||
| Description: | Predicted to have protein kinase activity. Predicted to be involved in protein phosphorylation. Predicted to localize to the nucleus. Orthologous to human PRPF4B (pre-mRNA processing factor 4B). | |||||||||||||
| Genome Resources: | Alliance (1), Gene:393182 (1), Ensembl(GRCz11):ENSDARG00000008784 (2) | |||||||||||||
| Directly Submitted Expression Data: | 1 figure (1 image) from Thisse et al., 2004 [MGC:56223] |
| Wild-type Stages, Structures: | Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h) |
| Curated Microarray Expression: | GEO (1) , Expression Atlas (1) |
MUTATIONS AND SEQUENCE TARGETING REAGENTS
| Allele | Type | Localization | Consequence | Mutagen | Suppliers |
|---|---|---|---|---|---|
| sa15327 | Point Mutation | Unknown | Premature Stop | ENU |
|
| sa19802 | Point Mutation | Unknown | Splice Site | ENU |
|
| sa31285 | Point Mutation | Unknown | Premature Stop | ENU |
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GENE ONTOLOGY
| Ontology | GO Term |
|---|---|
| Biological Process | protein phosphorylation (more) |
| Cellular Component | nucleus (more) |
| Molecular Function | ATP binding (more) |
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000719 | Protein kinase domain |
| Active_site | IPR008271 | Serine/threonine-protein kinase, active site |
| Homologous_superfamily | IPR011009 | Protein kinase-like domain superfamily |
| Type | Name | Length (nt) | Analysis | |
|---|---|---|---|---|
| mRNA |
prpf4ba-201
(1)
|
3153 |
Select Tool
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| Browsers: UCSC, NCBI, Ensembl, ZFIN |
INTERACTIONS AND PATHWAYS
ANTIBODIES
No data available
PLASMIDS
No data available
CONSTRUCTS WITH SEQUENCES FROM prpf4ba
No data available
MARKER RELATIONSHIPS
| prpf4ba Contained in: | [BAC] DKEY-71K24 (1) (order this), DKEY-154P10 (1) (order this) |
| prpf4ba Encodes: | [cDNA] MGC:56223 (1) |
SEQUENCE INFORMATION
| Type | Accession # | Length (bp/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_200213 (1) | 1882 bp |
Select Tool
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| Genomic | GenBank:BX323807 (1) | 194313 bp | |
| Polypeptide | UniProtKB:B0V1K6 (1) | 986 aa |
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ORTHOLOGY for prpf4ba (
Chr:
2
)
CITATIONS (18)