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General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-935
Gene Name: RAD9 checkpoint clamp component A
Gene Symbol: rad9a
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: zgc:56197 (1), zgc:85638

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have 3'-5' exonuclease activity. Predicted to be involved in cellular response to ionizing radiation and intra-S DNA damage checkpoint. Predicted to localize to the checkpoint clamp  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56197]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13610 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15787 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rad9a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rad9a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process DNA damage checkpoint (more)
    Cellular Component checkpoint clamp complex (more)
    Molecular Function 3'-5' exonuclease activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007268 (1)
  • InterPro:IPR026584 (1)
  • Pfam:PF04139 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA rad9a-002 (1) 805
    mRNA rad9a-201 (1) 1702
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rad9a No data available
    MARKER RELATIONSHIPS
    rad9aContained in: [BAC] CH211-10K1 (1) (order this)
    rad9aEncodes: [cDNA] MGC:56197 (1) (order this), MGC:85638 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200207 (1) 1701bp
    Genomic GenBank:BX324205 (1) 168546bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8Q344 (1) 381aa
    Sequence Clusters UniGene:86305 (1)
    Sequence Information (all 15)
    ORTHOLOGY for rad9a (Chr: 14)
    CITATIONS (22)