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ZIRC
ZFIN ID: ZDB-GENE-040426-901
Gene Name: platelet-derived growth factor receptor-like
Gene Symbol: pdgfrl
Sequence Ontology ID : SO:0001217

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Previous Names: zgc:56104, zgc:77677

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits identical protein binding activity. Human ortholog(s) of this gene implicated in hepatocellular carcinoma. Orthologous to human PDGFRL (platelet derived growth factor receptor like).
GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 6 figures (6 images) from Thisse et al., 2004 [MGC:56104]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa79 Point Mutation Unknown Unknown ENU
sa6346 Point Mutation Unknown Premature Stop ENU
sa35708 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pdgfrl HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    colorectal cancer Colorectal cancer, somatic 114500
    hepatocellular carcinoma Hepatocellular cancer, somatic 114550
    DISEASE ASSOCIATED WITH pdgfrl VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function identical protein binding (more)
    GO Terms (all 2)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pdgfrl-201 (1) 1402
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pdgfrl No data available
    MARKER RELATIONSHIPS
    pdgfrl Contained in: [BAC] CH211-186K13 (1) (order this)
    pdgfrl Encodes: [cDNA] cssl:d212 (1), MGC:56104 (1) (order this), MGC:77677 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200314 (1) 1501 bp
    Genomic GenBank:CR384105 (1) 144285 bp
    Select Tool
    Polypeptide UniProtKB:F1QHI8 (1) 371 aa
    Sequence Clusters UniGene:78312 (1)
    Sequence Information (all 18)
    ORTHOLOGY for pdgfrl ( Chr: 14 )
    CITATIONS (25)